CBMS 2014 Presentation Sessions
Bioinformatics/Computational Biology
- HErCoOl: High-throughput Error Correction by Oligomers — Franco Milicchio and Mattia C.F. Prosperi
- Capturing Human Body Dynamics Using RNN based on Persistent Excitation Data Generator — Alaa Abdulrahman and Kamran Iqbal
- Assessment of G-quadruplex prediction tools — Giuseppe Tradigo, Laura Mannella and Pierangelo Veltri
- miXGENE tool for learning from heterogeneous gene expression data using prior knowledge — Matěj Holec, Valentin Gologuzov and Jiří Kléma
- Towards using Probabilities and Logic to Model Regulatory Networks — Antonio Goncalves, Irene Ong, Jeffrey Lewis and Vitor Costa
- A self-tuning genetic algorithm with applications in biomarker discovery — Dusan Popovic, Charalampos Moschopoulos, Ryo Sakai, Alejandro Sifrim, Jan Aerts, Yves Moreau and Bart De Moor
Collaboration tools
- Patients in Transition: E-messages as a Tool for Collaboration between Hospital and Community Healthcare – a Norwegian Case — Line Melby, Pieter Toussaint and Ragnhild Hellesø
- BUCOMAX: Collaborative Multimedia Platform for Real Time Support of Diagnosis and Teaching Based on Bucomaxillofacial Diagnostic Images — André Puel, Maria Inês Meurer, Aldo Von Wangenheim and Douglas D. J. De Macedo
- Defeasible reasoning and argument-based medical systems: an informal overview — Luca Longo
- Effects of mobile video-mediated communication for health care professionals in advanced home care of children — Johan Fredriksson, Kristina Groth, Minna Räsänen, Helena Bergius and Emma Rylander
- Multidisciplinary Work Practices: A Comparison of Three Major European Hospitals — Bridget Kane and Kristina Groth
- Expanding the HCI agenda in Healthcare — Bridget Kane and Saturnino Luz
- Aspects of Socially Assistive Robots Design for Dementia Care — Nikola Nestorov, Emer Stone, Patrick Lehane and Richard Eibrand
- A Laboratory-Targeted, Data Management and Processing System for the Early Detection Research Network — Rishi Verma, Andrew F. Hart, Chris A. Mattmann, Daniel J. Crichton, Heather Kincaid, Sean C. Kelly, Michael J. Joyce, Paul Zimdars, David L. Tabb, Jay D. Holman, Matthew Chambers, Kristen Anton, Maureen Colbert, Christos Patriotis, Sudhir Srivastava
Big Data/Data processing and analysis
- Profiling Cardiovascular Disease Event Risk through Clustering of Classification Association Rules — Shen Song, James Warren and Patricia Riddle
- Efficient Procedure and Methods to Determine Critical Electroporation Parameters — Gaddi Blumrosen, Alexander Golberg, Alireza Abazari, Mehmet Tonner and Martin Yarmush
- Biological Image Indexing for Content-Based Retrieval of Drug Effects in Phenotypic Screening Data of Macroparasites — Ahmed Gater and Rahul Singh
- MedInject: a General Purpose Information Retrieval Framework Applied in a Medical Context — Luiz O. Carvalho, Enzo Seraphim, Thatyana F. P. Seraphim, Agma J. M. Traina and Caetano Traina Jr.
- Being Similar is Not Enough: How to Bridge Usability Gap Through Diversity in Medical Images — Lúcio Fernandes Dutra Santos, Marcos Vinicius Naves Bedo, Marcelo Ponciano-Silva, Agma Juci Machado Traina and Caetano Traina
- Dimensionality Reduction with Random Indexing: an application on adverse drug event detection using electronic health records — Isak Karlsson and Jing Zhao
- A Real-Time Multi-Dimensional Visualization Framework For Critical And Complex Environments — Rishikesan Kamaleswaran and Carolyn Mcgregor
- Large-Scale Methodological Comparison of Acute Hypotensive Episode Forecasting Using MIMIC2 Physiological Waveforms — Yongwook Bryce Kim, Joohyun Seo and Una-May O’Reilly
Clinical Decision Support
- Social-Spider Optimization-based Artificial Neural Networks Training and its Applications for Parkinson’s Disease Identification — Luis Pereira, Douglas Rodrigues, Joao Paulo Papa and Silke Weber
- Learning Features from Medical Radiofrequency Ultrasonic Signals by Independent Component Analysis — Mahdi Tabassian, Nicola Testoni, Luca De Marchi, Francesca Galluzzo, Nicolo’ Speciale and Guido Masetti
- Optimum-Path Forest Applied for Breast Masses Classification — Patricia Ribeiro, Kelton Costa, Joao Paulo Papa and Roseli Romero
- Using Participant Similarity for the Classification of Epidemiological Data on Hepatic Steatosis — Tommy Hielscher, Myra Spiliopoulou, Henry Völzke and Jens-Peter Kühn
- A Method for a Real-time Novel Premature Infant Pain Profile using High Rate, High Volume Physiological Data Streams — Tanvi Naik, Carolyn McGregor, Andrew James, Nadja Bressan, Anirudh Thommandram and Shiron Fernando
- Can we avoid unnecessary polysomnographies in the diagnosis of Obstructive Sleep Apnea? — Liliana Leite, Cristina Santos and Pedro Pereira Rodrigues
- Using probabilistic graphical models to enhance the prognosis of health-related quality of life in adult survivors of critical illness — Claudia Camila Dias, Cristina Granja, Altamiro Costa-Pereira, Joao Gama and Pedro Pereira Rodrigues
- Applying Speculative Computation to Guideline-based Decision Support Systems — Tiago Oliveira, Ken Satoh, Paulo Novais and Jose Neves
- Tracebook: A Dynamic Checklist Support System — Shan Nan, Pieter Van Gorp, Hendrikus H.M. Korsten, Richard Vdovjak, Uzay Kaymak, Xudong Lu and Huilong Duan
- NerveGPS: A novel decision support system for ultrasound nerve block guidance — Christophe Philippona, Joshua Morse, Shantale Cyr, Roy Kazan, Mohamad Wehbe, Marilu Giacalone and Thomas Hemmerling
- FFRAT, a Rule-based System Evaluating Fall Risk in the Elderly — Luca Cattelani, Federico Chesani, Pierpaolo Palumbo, Luca Palmerini, Stefania Bandinelli, Clemens Becker and Lorenzo Chiari
- Automated Sleep-Wake Detection in Neonates from Cerebral Function Monitor Signals — J. Mikael Eklund, Nicholas Fontana, Edward Pugh, Carolyn McGregor, Paul Yielder, Andrew James, Matthew Keyzers, Cecil Hahn and Patrick McNamara
- Parametric Power Spectrum Analysis of ECG Signals for Obstructive Sleep Apnoea Classification — Xinqi Louis Wang, J. Mikael Eklund and Carolyn Mcgregor
Monitoring and Devices
- Data Recording, Amplification and Acquisition System for Microelectrode Array — Francisco Fambrini and José Hiroki Saito
- Low noise microelectrode array signal headstage pre-amplifier for in-vitro neuron culture — Francisco Fambrini and José Hiroki Saito
- Innovative computerized non-invasive intracranial pressure measurement technology and it’s clinical validation — Solventa Krakauskaite, Vytautas Petkus, Rolandas Zakelis, Laimonas Bartusis, Romanas Chomskis and Arminas Ragauskas
- EMG-Miner: automatic acquisition and processing of electromyographic signals — Nicola Ielpo, Barbara Calabrese, Arrigo Palumbo, Mario Cannataro, Stefano Ciliberti, Carmen Grillo and Maurizio Iocco
- Design and evaluation of a smartphone based wearable life-logging and social interaction system — William Burns, Chris Nugent, Paul McCullagh and Huiru Zheng
- Pervasive Motion Tracking and Muscle Activity Monitor — Richard Woodward, Sandra Shefelbine and Ravi Vaidyanathan
- Novel technology of non-invasive cerebreovascular autoregulation monitoring — Vytautas Petkus, Solventa Krakauskaite, Aidanas Preiksaitis, Saulius Rocka, Romanas Chomskis, Laimonas Bartusis and Arminas Ragauskas
- Effectively Introducing Mobile Solutions in Hospitals. The Importance of Process Perspective and KPIs — Mariano Corso, Paolo Locatelli, Elena Sini, Luca Gastaldi, Roberta Facchini, Roberto Moser and Michele Torresani
- Early experiences in COPD exacerbation detection — Mario Merone, Leonardo Onofri, Paolo Soda, Claudio Pedone, Raffaele Antonelli Incalzi and Giulio Iannello
- Mobili-T: A Mobile Swallowing-Therapy Device An interdisciplinary solution for patients with chronic dysphagia — Gabriela Constantinescu, Eleni Stroulia and Jana Rieger
Electronic medical records and system integration
- Real-World Data Set Parameters and Synthesization for Matching Identity in Clinical Protocols — Hanna Farah, Daniel Amyot and Khaled El Emam
- Adverse Drug Event Notification System — Tobias Krahn, Marco Eichelberg, Stefan Gudenkauf, Gokce B. Laleci Erturkmen and H.-Jürgen Appelrath
- Tracheostomy transfers: A case study in the application of formal methods to intra-hospital patient transfers — Areti Manataki, Jacques Fleuriot and Petros Papapanagiotou
- Electronic Health Records: a survey of the experiences and expectations of Irish dermatologists — Dmitri Wall, Caitriona Hackett, Bridget Kane, Kashif Ahmad and Bart Ramsay
Image Processing
- A Multicriteria Decision Making Method for Cervical Tumor Segmentation in Positron Emission Tomography — André Monteiro, Alexei Machado and Marcelo Lewer
- Robust Visual Tracking for Retinal Mapping in Computer-assisted Slit-lamp Imaging — Mateus de Souza, Rogerio Richa, Andre Puel, Jonas Caetano, Eros Comunello and Aldo von Wangenheim
- On the Automation of the Tear Film Non-Invasive Break-Up Test — Adrián Carpente Recouso, Lucía Ramos García, Noelia Barreira Rodríguez, Manuel González Penedo, Hugo Pena Verdeal and María Jesús Giráldez Fernández
- Body Segment Classification for Visible Human Cross Section Slices — Zhiyun Xue, Sameer Antani, Rodney Long, Dina Demner and George Thoma
- Rotation Detection in Chest Radiographs based on Generalized Line Histogram of Rib-Orientations — K.C. Santosh, Sema Candemir, Stefan Jaeger, Les Folio, Alexandros Karargyris, Sameer Antani and George Thoma
- A Novel Model-based Measure for Quality Evaluation of Image Registration Techniques in DCE-MRI — Stefano Marrone, Gabriele Piantadosi, Roberta Fusco, Antonella Petrillo, Mario Sansone and Carlo Sansone
- Investigation of the Impact of Compression on the Perceptional Quality of Laparoscopic Videos — Bernd Münzer, Klaus Schoeffmann, Laszlo Boeszoermenyi, J.F. Smulders and Jack J. Jakimowicz
- New Image Analysis Technique for Quantitative Longitudinal Assessment of Lung Pathology on CT in Infected Rhesus Macaques — Jeffrey Solomon, Reed Johnson, Deborah Douglas and Dima Hammoud
- Computing Cardiac Strain From Variational Optical Flow In Four-Dimensional Echocardiography — Saurabh Vyas, James Gammie and Philippe Burlina
- Using sub-dictionaries for image representation based on the bag-of-visual-words approach — Glauco Vitor Pedrosa, Agma Traina and Caetano Traina
- Evaluating a row store data model for full-content DICOM management — Alexandre Savaris, Theo Härder and Aldo von Wangenheim
- An Automated Approach for Fibrin Network Segmentation and Structure Identification in 3D Confocal Microscopy Images — Jianxu Chen, Oleg Kim, Rustem Litvinov, John Weisel, Mark Alber and Danny Chen
- Classifying Craniosynostosis with a 3D Projection-Based Feature Extraction System — Irma Lam, Michael Cunningham, Matthew Speltz and Linda Shapiro
- Real-Time Fine-Tuned Adjustment of Fiber Tracking Parameters — Adiel Mittmann, Eros Comunello and Aldo von Wangenheim
- Performance Evaluation of Medical Image Similarity Analysis in a Heterogeneous Architecture — José Raniery Ferreira Junior, Marcelo Oliveira and André Lage
- Calculation and Visualization of Range of Motion of Hip Joint from MRI — Sahar Aghayan and Wonsook Lee
Internet Health Search and Discovery
- Social Network Analysis to Delineate Interaction Patterns that Predict Weight Loss Performance — Taridzo Chomutare, Anna Xu and Sriram Iyengar
- Semantic Search and NLP-Based Diagnostic Support — Yefim Kats
- Maturity assessment of Wikipedia medical articles — Riccardo Conti, Emanuel Marzini, Angelo Spognardi, Ilaria Matteucci, Paolo Mori and Marinella Petrocchi
Medical Education and Patient Simulation
- Death in High-Fidelity Simulation: A Bioethical Analysis — Andrew Goldberg, Jesse Hochkeppel, Adam Levine and Samuel Demaria
- Deformation method using physical parameters composed of different tissue structures — Ana C. M. T. G. de Oliveira, Romero Tori, Fátima Nunes, Wyllian Brito, João L. Bernardes and Rafael Siqueira Torres
- Design of a training system for intrapedicular screw positioning in the lumbar region — Nataly Garcia-Morales, Daniel Lorias and Vicente Gonzales
- Pilot Study: Supplementing Surgical Training for Medical Students Using a Low-Cost Virtual Reality Simulator — Chung Hyuk Park, Kenneth Wilson and Ayanna Howard
- A framework for a Social Semantic Registry of IT skills for healthcare workforce — Stathis Th. Konstantinidis and Panagiotis Bamidis
- Patient-Specific Interactive Simulation of Compression Ultrasonography — Kresimir Petrinec, Eric Savitsky and Demetri Terzopoulos
- Decoding Movements from Human Deep Brain Local Field Potentials (LFPs) Using Radial Basis Function Neural Network (RBFNN) — Mohammad Islam, Khondaker Mamun, Muhammad Khan, Hai Deng and Shouyan Wang
- Using simulations and experiential learning approaches to train carers of seniors — Panagiotis Bamidis, Panagiotis Antoniou and Efstathios Sidiropoulos
Ontologies, Terminologies, and Natural Language Processing
- Computer-Based Coding of Occupation Codes for Epidemiological Analyses — Daniel Russ, Calvin Johnson, Melissa Friesen and Kwan-Yuet Ho
- Computable Declarative Representation of Clinical Assessment Scales in EHRs — Mercedes Arguello-Casteleiro, Nicolas Matentzoglu, Bijan Parsia and Sebastian Brandt
- Estimating and Analysing Coordination in Medical Terminologies — Cornelia Hedeler, Bijan Parsia and Sebastian Brandt
- Nanopublishing clinical diagnoses: tracking diagnostic knowledge base content and utilization — Alejandro Rodriguez, Marcos Martinez Romero, Mikel Egaña Aranguren and Mark Wilkinson
- The Medical Cyber-Physical Systems Activity at EIT: A Look under the Hood — Daniel Sonntag and Sonja Zillner
- A Domain Specific Ontology Authoring Environment for a Clinical Documentation System — Matthew Horridge, Sebastian Brandt and Bijan Parsia
Security and privacy
- A Benchmark of Globally-Optimal Anonymization Methods for Biomedical Data — Fabian Prasser, Florian Kohlmayer and Klaus Kuhn
- An Expertise-driven Authoring Tool of Privacy Policies for e-Health — Riccardo Conti, Ilaria Matteucci, Paolo Mori and Marinella Petrocchi
- An Agent-based Infrastructure for Secure Medical Imaging System Integration — Weina Ma and Kamran Sartipi
- The Role of Inference in the Anonymization of Medical Records — Athanasios Zigomitros, Agusti Solanas and Constantinos Patsakis
- Privacy-Aware Large-Scale Virological and Epidemiological Data Monitoring — Constantinos Patsakis, Michael Clear, Paul Laird and Mélanie Bouroche